nipype.interfaces.vista.vista module

Vnifti2Image

Link to code

Bases: CommandLine

Wrapped executable: vnifti2image.

Convert a nifti file into a vista file.

Example

>>> vimage = Vnifti2Image()
>>> vimage.inputs.in_file = 'image.nii'
>>> vimage.cmdline
'vnifti2image -in image.nii -out image.v'
>>> vimage.run()
Mandatory Inputs:

in_file (a pathlike object or string representing an existing file) – In file. Maps to a command-line argument: -in %s (position: 1).

Optional Inputs:

  • args (a string) – Additional parameters to the command. Maps to a command-line argument: %s.

  • attributes (a pathlike object or string representing an existing file) – Attribute file. Maps to a command-line argument: -attr %s (position: 2).

  • environ (a dictionary with keys which are a bytes or None or a value of class ‘str’ and with values which are a bytes or None or a value of class ‘str’) – Environment variables. (Nipype default value: {})

  • out_file (a pathlike object or string representing a file) – Output data file. Maps to a command-line argument: -out %s (position: -1).

Outputs:

out_file (a pathlike object or string representing an existing file) – Output vista file.

VtoMat

Link to code

Bases: CommandLine

Wrapped executable: vtomat.

Convert a nifti file into a vista file.

Example

>>> vimage = VtoMat()
>>> vimage.inputs.in_file = 'image.v'
>>> vimage.cmdline
'vtomat -in image.v -out image.mat'
>>> vimage.run()
Mandatory Inputs:

in_file (a pathlike object or string representing an existing file) – In file. Maps to a command-line argument: -in %s (position: 1).

Optional Inputs:

  • args (a string) – Additional parameters to the command. Maps to a command-line argument: %s.

  • environ (a dictionary with keys which are a bytes or None or a value of class ‘str’ and with values which are a bytes or None or a value of class ‘str’) – Environment variables. (Nipype default value: {})

  • out_file (a pathlike object or string representing a file) – Output mat file. Maps to a command-line argument: -out %s (position: -1).

Outputs:

out_file (a pathlike object or string representing an existing file) – Output mat file.