nipype.interfaces.semtools.testing.landmarkscompare module

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LandmarksCompare

Link to code

Bases: SEMLikeCommandLine

Wrapped executable: LandmarksCompare.

title: Compare Fiducials

category: Testing

description: Compares two .fcsv or .wts text files and verifies that they are identicle. Used for testing landmarks files.

contributor: Ali Ghayoor

Optional Inputs:

  • args (a string) – Additional parameters to the command. Maps to a command-line argument: %s.

  • environ (a dictionary with keys which are a bytes or None or a value of class ‘str’ and with values which are a bytes or None or a value of class ‘str’) – Environment variables. (Nipype default value: {})

  • inputLandmarkFile1 (a pathlike object or string representing an existing file) – First input landmark file (.fcsv or .wts). Maps to a command-line argument: --inputLandmarkFile1 %s.

  • inputLandmarkFile2 (a pathlike object or string representing an existing file) – Second input landmark file (.fcsv or .wts). Maps to a command-line argument: --inputLandmarkFile2 %s.

  • tolerance (a float) – The maximum error (in mm) allowed in each direction of a landmark. Maps to a command-line argument: --tolerance %f.