nipype.interfaces.semtools.diffusion.tractography.commandlineonly module

Autogenerated file - DO NOT EDIT If you spot a bug, please report it on the mailing list and/or change the generator.

fiberstats

Link to code

Bases: SEMLikeCommandLine

Wrapped executable: fiberstats.

title: FiberStats (DTIProcess)

category: Diffusion.Tractography.CommandLineOnly

description: Obsolete tool - Not used anymore

version: 1.1.0

documentation-url: http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DTIProcess

license: Copyright (c) Casey Goodlett. All rights reserved.
See http://www.ia.unc.edu/dev/Copyright.htm for details.

This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the above copyright notices for more information.

contributor: Casey Goodlett

acknowledgements: Hans Johnson(1,3,4); Kent Williams(1); (1=University of Iowa Department of Psychiatry, 3=University of Iowa Department of Biomedical Engineering, 4=University of Iowa Department of Electrical and Computer Engineering) provided conversions to make DTIProcess compatible with Slicer execution, and simplified the stand-alone build requirements by removing the dependencies on boost and a fortran compiler.

Optional Inputs:

  • args (a string) – Additional parameters to the command. Maps to a command-line argument: %s.

  • environ (a dictionary with keys which are a bytes or None or a value of class ‘str’ and with values which are a bytes or None or a value of class ‘str’) – Environment variables. (Nipype default value: {})

  • fiber_file (a pathlike object or string representing an existing file) – DTI Fiber File. Maps to a command-line argument: --fiber_file %s.

  • verbose (a boolean) – Produce verbose output. Maps to a command-line argument: --verbose.