nipype.interfaces.minc.base module¶

The minc module provides classes for interfacing with the MINC command line tools. This module was written to work with MINC version 2.2.00.

Author: Carlo Hamalainen <carlo@carlo-hamalainen.net>: http://carlo-hamalainen.net

class nipype.interfaces.minc.base.Info¶

Bases: object

Handle MINC version information.

version refers to the version of MINC on the system

static version()¶

Check for minc version on the system

Parameters:: None
Returns:: version – Version number as dict or None if MINC not found
Return type:: dict

nipype.interfaces.minc.base.aggregate_filename(files, new_suffix)¶

Try to work out a sensible name given a set of files that have been combined in some way (e.g. averaged). If we can’t work out a sensible prefix, we use the first filename in the list.

Examples

>>> from nipype.interfaces.minc.base import aggregate_filename
>>> f = aggregate_filename(['/tmp/foo1.mnc', '/tmp/foo2.mnc', '/tmp/foo3.mnc'], 'averaged')
>>> os.path.split(f)[1] # This has a full path, so just check the filename.
'foo_averaged.mnc'

>>> f = aggregate_filename(['/tmp/foo1.mnc', '/tmp/blah1.mnc'], 'averaged')
>>> os.path.split(f)[1] # This has a full path, so just check the filename.
'foo1_averaged.mnc'

nipype.interfaces.minc.base.check_minc()¶: Returns True if and only if MINC is installed.’

nipype.interfaces.minc.base.no_minc()¶: Returns True if and only if MINC is not installed.