interfaces.slicer.utilities

EMSegmentTransformToNewFormat

Link to code

Wraps the executable command ``EMSegmentTransformToNewFormat ``.

title:

Transform MRML Files to New EMSegmenter Standard

category:

Utilities

description:

Transform MRML Files to New EMSegmenter Standard

Inputs:

[Optional]
inputMRMLFileName: (an existing file name)
        Active MRML scene that contains EMSegment algorithm parameters in
        the format before 3.6.3 - please include absolute file name in path.
        argument: ``--inputMRMLFileName %s``
outputMRMLFileName: (a boolean or a file name)
        Write out the MRML scene after transformation to format 3.6.3 has
        been made. - has to be in the same directory as the input MRML file
        due to Slicer Core bug - please include absolute file name in path
        argument: ``--outputMRMLFileName %s``
templateFlag: (a boolean)
        Set to true if the transformed mrml file should be used as template
        file
        argument: ``--templateFlag ``
args: (a unicode string)
        Additional parameters to the command
        argument: ``%s``
environ: (a dictionary with keys which are a bytes or None or a value
          of class 'str' and with values which are a bytes or None or a
          value of class 'str', nipype default value: {})
        Environment variables

Outputs:

outputMRMLFileName: (an existing file name)
        Write out the MRML scene after transformation to format 3.6.3 has
        been made. - has to be in the same directory as the input MRML file
        due to Slicer Core bug - please include absolute file name in path