About

Citation

Reference

Gorgolewski, Krzysztof J.; Esteban, Oscar; Ellis, David Gage; Notter, Michael Philipp; Ziegler, Erik; Johnson, Hans; Hamalainen, Carlo; Yvernault, Benjamin; Burns, Christopher; Manhães-Savio, Alexandre; Jarecka, Dorota; Markiewicz, Christopher J.; Salo, Taylor; Clark, Daniel; Waskom, Michael; Wong, Jason; Modat, Marc; Dewey, Blake E; Clark, Michael G.; Dayan, Michael; Loney, Fred; Madison, Cindee; Gramfort, Alexandre; Keshavan, Anisha; Berleant, Shoshana; Pinsard, Basile; Goncalves, Mathias; Clark, Dav; Cipollini, Ben; Varoquaux, Gael; Wassermann , Demian; Rokem, Ariel; Halchenko, Yaroslav O.; Forbes, Jessica; Moloney, Brendan; Malone, Ian B.; Hanke, Michael; Mordom, David; Buchanan, Colin; PAULI, WOLFGANG M.; Huntenburg, Julia M.; Horea, Christian; Schwartz, Yannick; Tungaraza, Rosalia; Iqbal, Shariq; Kleesiek, Jens; Sikka, Sharad; Frohlich, Caroline; Kent, James; Perez-Guevara, Martin; Watanabe, Aimi; Welch, David; Cumba, Chad; Ginsburg, Daniel; Eshaghi, Arman; Kastman, Erik; Bougacha, Salma; Blair, Ross; Acland, Benjamin; Gillman, Ashley; Schaefer, Alexander; Nichols, B. Nolan; Giavasis, Steven; Erickson, Drew; Correa, Carlos; Ghayoor, Ali; Küttner, René; Haselgrove, Christian; Zhou, Dale; Craddock, R. Cameron; Haehn, Daniel; Lampe, Leonie; Millman, Jarrod; Lai, Jeff; Renfro, Mandy; Liu, Siqi; Stadler, Jörg; Glatard, Tristan; Kahn, Ari E.; Kong, Xiang-Zhen; Triplett, William; Park, Anne; McDermottroe, Conor; Hallquist, Michael; Poldrack, Russell; Perkins, L. Nathan; Noel, Maxime; Gerhard, Stephan; Salvatore, John; Mertz, Fred; Broderick, William; Inati, Souheil; Hinds, Oliver; Brett, Matthew; Durnez, Joke; Tambini, Arielle; Rothmei, Simon; Andberg, Sami Kristian; Cooper, Gavin; Marina, Ana; Mattfeld, Aaron; Urchs, Sebastian; Sharp, Paul; Matsubara, K; Geisler, Daniel; Cheung, Brian; Floren, Andrew; Nickson, Thomas; Pannetier, Nicolas; Weinstein, Alejandro; Dubois, Mathieu; Arias, Jaime; Tarbert, Claire; Schlamp, Kai; Jordan, Kesshi; Liem, Franz; Saase, Victor; Harms, Robbert; Khanuja, Ranjeet; Podranski, Kornelius; Flandin, Guillaume; Papadopoulos Orfanos, Dimitri; Schwabacher, Isaac; McNamee, Daniel; Falkiewicz, Marcel; Pellman, John; Linkersdörfer, Janosch; Varada, Jan; Pérez-García, Fernando; Davison, Andrew; Shachnev, Dmitry; Ghosh, Satrajit (2017). Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in Python. 0.13.0 Zenodo. 10.5281/zenodo.581704

@misc{gorgolewski_krzysztof_j_2017_581704,
     author   = {Gorgolewski, Krzysztof J. and
             Esteban, Oscar and
             Ellis, David Gage and
             Notter, Michael Philipp and
             Ziegler, Erik and
             Johnson, Hans and
             Hamalainen, Carlo and
             Yvernault, Benjamin and
             Burns, Christopher and
             Manhães-Savio, Alexandre and
             Jarecka, Dorota and
             Markiewicz, Christopher J. and
             Salo, Taylor and
             Clark, Daniel and
             Waskom, Michael and
             Wong, Jason and
             Modat, Marc and
             Dewey, Blake E and
             Clark, Michael G. and
             Dayan, Michael and
             Loney, Fred and
             Madison, Cindee and
             Gramfort, Alexandre and
             Keshavan, Anisha and
             Berleant, Shoshana and
             Pinsard, Basile and
             Goncalves, Mathias and
             Clark, Dav and
             Cipollini, Ben and
             Varoquaux, Gael and
             Wassermann , Demian and
             Rokem, Ariel and
             Halchenko, Yaroslav O. and
             Forbes, Jessica and
             Moloney, Brendan and
             Malone, Ian B. and
             Hanke, Michael and
             Mordom, David and
             Buchanan, Colin and
             PAULI, WOLFGANG M. and
             Huntenburg, Julia M. and
             Horea, Christian and
             Schwartz, Yannick and
             Tungaraza, Rosalia and
             Iqbal, Shariq and
             Kleesiek, Jens and
             Sikka, Sharad and
             Frohlich, Caroline and
             Kent, James and
             Perez-Guevara, Martin and
             Watanabe, Aimi and
             Welch, David and
             Cumba, Chad and
             Ginsburg, Daniel and
             Eshaghi, Arman and
             Kastman, Erik and
             Bougacha, Salma and
             Blair, Ross and
             Acland, Benjamin and
             Gillman, Ashley and
             Schaefer, Alexander and
             Nichols, B. Nolan and
             Giavasis, Steven and
             Erickson, Drew and
             Correa, Carlos and
             Ghayoor, Ali and
             Küttner, René and
             Haselgrove, Christian and
             Zhou, Dale and
             Craddock, R. Cameron and
             Haehn, Daniel and
             Lampe, Leonie and
             Millman, Jarrod and
             Lai, Jeff and
             Renfro, Mandy and
             Liu, Siqi and
             Stadler, Jörg and
             Glatard, Tristan and
             Kahn, Ari E. and
             Kong, Xiang-Zhen and
             Triplett, William and
             Park, Anne and
             McDermottroe, Conor and
             Hallquist, Michael and
             Poldrack, Russell and
             Perkins, L. Nathan and
             Noel, Maxime and
             Gerhard, Stephan and
             Salvatore, John and
             Mertz, Fred and
             Broderick, William and
             Inati, Souheil and
             Hinds, Oliver and
             Brett, Matthew and
             Durnez, Joke and
             Tambini, Arielle and
             Rothmei, Simon and
             Andberg, Sami Kristian and
             Cooper, Gavin and
             Marina, Ana and
             Mattfeld, Aaron and
             Urchs, Sebastian and
             Sharp, Paul and
             Matsubara, K and
             Geisler, Daniel and
             Cheung, Brian and
             Floren, Andrew and
             Nickson, Thomas and
             Pannetier, Nicolas and
             Weinstein, Alejandro and
             Dubois, Mathieu and
             Arias, Jaime and
             Tarbert, Claire and
             Schlamp, Kai and
             Jordan, Kesshi and
             Liem, Franz and
             Saase, Victor and
             Harms, Robbert and
             Khanuja, Ranjeet and
             Podranski, Kornelius and
             Flandin, Guillaume and
             Papadopoulos Orfanos, Dimitri and
             Schwabacher, Isaac and
             McNamee, Daniel and
             Falkiewicz, Marcel and
             Pellman, John and
             Linkersdörfer, Janosch and
             Varada, Jan and
             Pérez-García, Fernando and
             Davison, Andrew and
             Shachnev, Dmitry and
             Ghosh, Satrajit},
     title        = {nipy/nipype: Release 0.13.1},
     month        = may,
     year         = 2017,
     doi          = {10.5281/zenodo.581704},
     url          = {https://doi.org/10.5281/zenodo.581704}
 }

If you are a Nipype contributor and your name is not mentioned above please submit a Pull Request modifying .zenodo.json file.

When publishing results obtained using Nipype we strongly encourage citing the above reference to give credit to all Nipype contributors. However, if for some reason the journal you are publishing with does not allow you do cite software this way you can use the initial paper published in 2011 (see below).

Reference

Gorgolewski K, Burns CD, Madison C, Clark D, Halchenko YO, Waskom ML, Ghosh SS. (2011). Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in Python. Front. Neuroimform. 5:13.

Download Paper

@article { Gorgolewski2011,
    title            = "Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in python.",
    year             = "2011",
    author           = "Krzysztof Gorgolewski and Christopher D Burns and Cindee Madison and Dav Clark and Yaroslav O Halchenko and Michael L Waskom and Satrajit S Ghosh",
    journal          = "Front Neuroinform",
    volume           = "5",
    month            = "08",
    doi              = "10.3389/fninf.2011.00013",
    pubmed           = "21897815",
    url              = "https://doi.org/10.3389/fninf.2011.00013",
    issn             = "1662-5196"}

Code contributors

See Github contributors list.