nipype.algorithms.stats module¶
Managing statistical maps
ActivationCount¶
Bases: SimpleInterface
Calculate a simple Activation Count Maps
Adapted from: https://github.com/poldracklab/CNP_task_analysis/ blob/61c27f5992db9d8800884f8ffceb73e6957db8af/CNP_2nd_level_ACM.py
- Mandatory Inputs:
in_files (a list of items which are a pathlike object or string representing an existing file) – Input file, generally a list of z-stat maps.
threshold (a float) – Binarization threshold. E.g. a threshold of 1.65 corresponds to a two-sided Z-test of p<.10.
- Outputs:
acm_neg (a pathlike object or string representing an existing file) – Negative activation count map.
acm_pos (a pathlike object or string representing an existing file) – Positive activation count map.
out_file (a pathlike object or string representing an existing file) – Output activation count map.