interfaces.semtools.converters¶
DWICompare¶
Wraps the executable command `` DWICompare ``.
title: Nrrd DWI comparison
category: Converters
description: Compares two nrrd format DWI images and verifies that gradient magnitudes, gradient directions, measurement frame, and max B0 value are identicle. Used for testing DWIConvert.
version: 0.1.0.$Revision: 916 $(alpha)
documentation-url: http://www.slicer.org/slicerWiki/index.php/Documentation/4.1/Modules/DWIConvert
license: https://www.nitrc.org/svn/brains/BuildScripts/trunk/License.txt
contributor: Mark Scully (UIowa)
acknowledgements: This work is part of the National Alliance for Medical Image Computing (NAMIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Additional support for DTI data produced on Philips scanners was contributed by Vincent Magnotta and Hans Johnson at the University of Iowa.
Inputs:
[Optional]
inputVolume1: (a pathlike object or string representing an existing
file)
First input volume (.nhdr or .nrrd)
argument: ``--inputVolume1 %s``
inputVolume2: (a pathlike object or string representing an existing
file)
Second input volume (.nhdr or .nrrd)
argument: ``--inputVolume2 %s``
args: (a unicode string)
Additional parameters to the command
argument: ``%s``
environ: (a dictionary with keys which are a bytes or None or a value
of class 'str' and with values which are a bytes or None or a
value of class 'str', nipype default value: {})
Environment variables
Outputs:
None
DWISimpleCompare¶
Wraps the executable command `` DWISimpleCompare ``.
title: Nrrd DWI comparison
category: Converters
description: Compares two nrrd format DWI images and verifies that gradient magnitudes, gradient directions, measurement frame, and max B0 value are identicle. Used for testing DWIConvert.
version: 0.1.0.$Revision: 916 $(alpha)
documentation-url: http://www.slicer.org/slicerWiki/index.php/Documentation/4.1/Modules/DWIConvert
license: https://www.nitrc.org/svn/brains/BuildScripts/trunk/License.txt
contributor: Mark Scully (UIowa)
acknowledgements: This work is part of the National Alliance for Medical Image Computing (NAMIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Additional support for DTI data produced on Philips scanners was contributed by Vincent Magnotta and Hans Johnson at the University of Iowa.
Inputs:
[Optional]
inputVolume1: (a pathlike object or string representing an existing
file)
First input volume (.nhdr or .nrrd)
argument: ``--inputVolume1 %s``
inputVolume2: (a pathlike object or string representing an existing
file)
Second input volume (.nhdr or .nrrd)
argument: ``--inputVolume2 %s``
checkDWIData: (a boolean)
check for existence of DWI data, and if present, compare it
argument: ``--checkDWIData ``
args: (a unicode string)
Additional parameters to the command
argument: ``%s``
environ: (a dictionary with keys which are a bytes or None or a value
of class 'str' and with values which are a bytes or None or a
value of class 'str', nipype default value: {})
Environment variables
Outputs:
None