interfaces.slicer.quantification.changequantification¶
IntensityDifferenceMetric¶
Wraps the executable command ``IntensityDifferenceMetric ``.
- title:
- Intensity Difference Change Detection (FAST)
- category:
- Quantification.ChangeQuantification
- description:
- Quantifies the changes between two spatially aligned images based on the pixel-wise difference of image intensities.
version: 0.1
contributor: Andrey Fedorov
acknowledgements:
Inputs:
[Optional]
sensitivityThreshold: (a float)
This parameter should be between 0 and 1, and defines how sensitive
the metric should be to the intensity changes.
argument: ``--sensitivityThreshold %f``
changingBandSize: (an integer (int or long))
How far (in mm) from the boundary of the segmentation should the
intensity changes be considered.
argument: ``--changingBandSize %d``
baselineVolume: (an existing file name)
Baseline volume to be compared to
argument: ``%s``, position: -4
baselineSegmentationVolume: (an existing file name)
Label volume that contains segmentation of the structure of interest
in the baseline volume.
argument: ``%s``, position: -3
followupVolume: (an existing file name)
Followup volume to be compare to the baseline
argument: ``%s``, position: -2
outputVolume: (a boolean or a file name)
Output volume to keep the results of change quantification.
argument: ``%s``, position: -1
reportFileName: (a boolean or a file name)
Report file name
argument: ``--reportFileName %s``
args: (a unicode string)
Additional parameters to the command
argument: ``%s``
environ: (a dictionary with keys which are a bytes or None or a value
of class 'str' and with values which are a bytes or None or a
value of class 'str', nipype default value: {})
Environment variables
Outputs:
outputVolume: (an existing file name)
Output volume to keep the results of change quantification.
reportFileName: (an existing file name)
Report file name