interfaces.slicer.filtering.votingbinaryholefillingimagefilter¶
VotingBinaryHoleFillingImageFilter¶
Wraps the executable command ``VotingBinaryHoleFillingImageFilter ``.
title: Voting Binary Hole Filling Image Filter
category: Filtering
description: Applies a voting operation in order to fill-in cavities. This can be used for smoothing contours and for filling holes in binary images. This technique is used frequently when segmenting complete organs that may have ducts or vasculature that may not have been included in the initial segmentation, e.g. lungs, kidneys, liver.
version: 0.1.0.$Revision: 19608 $(alpha)
documentation-url: http://wiki.slicer.org/slicerWiki/index.php/Documentation/4.1/Modules/VotingBinaryHoleFillingImageFilter
contributor: Bill Lorensen (GE)
acknowledgements: This command module was derived from Insight/Examples/Filtering/VotingBinaryHoleFillingImageFilter (copyright) Insight Software Consortium
Inputs:
[Optional]
background: (an integer (int or long))
The value associated with the background (not object)
argument: ``--background %d``
majorityThreshold: (an integer (int or long))
The number of pixels over 50% that will decide whether an OFF pixel
will become ON or not. For example, if the neighborhood of a pixel
has 124 pixels (excluding itself), the 50% will be 62, and if you
set a Majority threshold of 5, that means that the filter will
require 67 or more neighbor pixels to be ON in order to switch the
current OFF pixel to ON.
argument: ``--majorityThreshold %d``
radius: (a list of items which are an integer (int or long))
The radius of a hole to be filled
argument: ``--radius %s``
outputVolume: (a boolean or a file name)
Output filtered
argument: ``%s``, position: -1
foreground: (an integer (int or long))
The value associated with the foreground (object)
argument: ``--foreground %d``
inputVolume: (an existing file name)
Input volume to be filtered
argument: ``%s``, position: -2
args: (a unicode string)
Additional parameters to the command
argument: ``%s``
environ: (a dictionary with keys which are a bytes or None or a value
of class 'str' and with values which are a bytes or None or a
value of class 'str', nipype default value: {})
Environment variables
Outputs:
outputVolume: (an existing file name)
Output filtered