interfaces.semtools.registration.brainsresize¶
BRAINSResize¶
Wraps the executable command `` BRAINSResize ``.
title: Resize Image (BRAINS)
category: Registration
description: This program is useful for downsampling an image by a constant scale factor.
version: 3.0.0
license: https://www.nitrc.org/svn/brains/BuildScripts/trunk/License.txt
contributor: This tool was developed by Hans Johnson.
acknowledgements: The development of this tool was supported by funding from grants NS050568 and NS40068 from the National Institute of Neurological Disorders and Stroke and grants MH31593, MH40856, from the National Institute of Mental Health.
Inputs:
[Optional]
pixelType: ('float' or 'short' or 'ushort' or 'int' or 'uint' or
'uchar' or 'binary')
Specifies the pixel type for the input/output images. The 'binary'
pixel type uses a modified algorithm whereby the image is read in as
unsigned char, a signed distance map is created, signed distance map
is resampled, and then a thresholded image of type unsigned char is
written to disk.
argument: ``--pixelType %s``
outputVolume: (a boolean or a file name)
Resulting scaled image
argument: ``--outputVolume %s``
inputVolume: (an existing file name)
Image To Scale
argument: ``--inputVolume %s``
scaleFactor: (a float)
The scale factor for the image spacing.
argument: ``--scaleFactor %f``
args: (a unicode string)
Additional parameters to the command
argument: ``%s``
environ: (a dictionary with keys which are a bytes or None or a value
of class 'str' and with values which are a bytes or None or a
value of class 'str', nipype default value: {})
Environment variables
Outputs:
outputVolume: (an existing file name)
Resulting scaled image