nipype.interfaces.semtools.legacy.registration module

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scalartransform

Link to code

Bases: SEMLikeCommandLine

Wrapped executable: scalartransform.

title: ScalarTransform (DTIProcess)

category: Legacy.Registration

version: 1.0.0

documentation-url: http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DTIProcess

license: Copyright (c) Casey Goodlett. All rights reserved.
See http://www.ia.unc.edu/dev/Copyright.htm for details.

This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the above copyright notices for more information.

contributor: Casey Goodlett

Optional Inputs:

  • args (a string) – Additional parameters to the command. Maps to a command-line argument: %s.

  • deformation (a pathlike object or string representing an existing file) – Deformation field. Maps to a command-line argument: --deformation %s.

  • environ (a dictionary with keys which are a bytes or None or a value of class ‘str’ and with values which are a bytes or None or a value of class ‘str’) – Environment variables. (Nipype default value: {})

  • h_field (a boolean) – The deformation is an h-field. Maps to a command-line argument: --h_field.

  • input_image (a pathlike object or string representing an existing file) – Image to transform. Maps to a command-line argument: --input_image %s.

  • interpolation (‘nearestneighbor’ or ‘linear’ or ‘cubic’) – Interpolation type (nearestneighbor, linear, cubic). Maps to a command-line argument: --interpolation %s.

  • invert (a boolean) – Invert transform before applying. Maps to a command-line argument: --invert.

  • output_image (a boolean or a pathlike object or string representing a file) – The transformed image. Maps to a command-line argument: --output_image %s.

  • transformation (a boolean or a pathlike object or string representing a file) – Output file for transformation parameters. Maps to a command-line argument: --transformation %s.

Outputs:

  • output_image (a pathlike object or string representing an existing file) – The transformed image.

  • transformation (a pathlike object or string representing an existing file) – Output file for transformation parameters.