nipype.interfaces.semtools.diffusion.maxcurvature module¶
Autogenerated file - DO NOT EDIT If you spot a bug, please report it on the mailing list and/or change the generator.
maxcurvature¶
Bases: SEMLikeCommandLine
Wrapped executable:
maxcurvature
.title: MaxCurvature-Hessian (DTIProcess)
category: Diffusion
description: This program computes the Hessian of the FA image (–image). We use this scalar image as a registration input when doing DTI atlas building. For most adult FA we use a sigma of 2 whereas for neonate or primate images and sigma of 1 or 1.5 is more appropriate. For really noisy images, 2.5 - 4 can be considered. The final image (–output) shows the main feature of the input image.
version: 1.1.0
documentation-url: http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DTIProcess
- license: Copyright (c) Casey Goodlett. All rights reserved.
- See http://www.ia.unc.edu/dev/Copyright.htm for details.
This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the above copyright notices for more information.
contributor: Casey Goodlett
acknowledgements: Hans Johnson(1,3,4); Kent Williams(1); (1=University of Iowa Department of Psychiatry, 3=University of Iowa Department of Biomedical Engineering, 4=University of Iowa Department of Electrical and Computer Engineering) provided conversions to make DTIProcess compatible with Slicer execution, and simplified the stand-alone build requirements by removing the dependancies on boost and a fortran compiler.
- Optional Inputs
args (a string) – Additional parameters to the command. Maps to a command-line argument:
%s
.environ (a dictionary with keys which are a bytes or None or a value of class ‘str’ and with values which are a bytes or None or a value of class ‘str’) – Environment variables. (Nipype default value:
{}
)image (a pathlike object or string representing an existing file) – FA Image. Maps to a command-line argument:
--image %s
.output (a boolean or a pathlike object or string representing a file) – Output File. Maps to a command-line argument:
--output %s
.sigma (a float) – Scale of Gradients. Maps to a command-line argument:
--sigma %f
.verbose (a boolean) – Produce verbose output. Maps to a command-line argument:
--verbose
.- Outputs
output (a pathlike object or string representing an existing file) – Output File.