nipype.interfaces.dtitk.base module¶
The dtitk module provides classes for interfacing with the DTITK command line tools.
These are the base tools for working with DTITK. Preprocessing tools are found in dtitk/preprocess.py Registration tools are found in dtitk/registration.py
Currently these tools are supported:
Rigid Tensor Registration
Affine Tensor Registration
Diffeomorphic Tensor Registration
Combine affiine and diffeomorphic transforms
Application of transform to tensor and scalar volumes
Threshold and Binarize
Adjusting the voxel space of tensor and scalar volumes
Resampling tensor and scalar volumes
Calculation of tensor metrics from tensor volume
Examples
See the docstrings of the individual classes for examples.
CommandLineDtitk¶
Bases: CommandLine
- Optional Inputs
args (a string) – Additional parameters to the command. Maps to a command-line argument:
%s
.environ (a dictionary with keys which are a bytes or None or a value of class ‘str’ and with values which are a bytes or None or a value of class ‘str’) – Environment variables. (Nipype default value:
{}
)
- class nipype.interfaces.dtitk.base.DTITKRenameMixin(*args, **kwargs)¶
Bases:
object